Alex di Genova, cand Ph.D.

Profesor Asistente

Centro de Regulación del Genoma

Centro de Modelamiento Matemético

Facultad de Ciencias Físicas y Mateméticas

Universidad de Chile

Línea de Investigación

Bioinformática

Publicaciones

A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment. 2014. Travisany D, Cortés MP, Latorre M, Di Genova A, Budinich M, Bobadilla-Fazzini RA, Parada P, González M, Maass A.

Res Microbiol. 165(9):743-52. doi: 10.1016/j.resmic.2014.08.004. Epub 2014 Aug 19.

Whole genome comparison between table and wine grapes reveals a comprehensive catalog of structural variants. 2014. Di Genova A, Almeida AM, Muñoz-Espinoza C, Vizoso P, Travisany D, Moraga C, Pinto M, Hinrichsen P, Orellana A, Maass A.

BMC Plant Biol;14:7. doi: 10.1186/1471-2229-14-7.

Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data. 2013. González-Agüero M, García-Rojas M, Di Genova A, Correa J, Maass A, Orellana A, Hinrichsen P. BMC Genomics;14:878. doi: 10.1186/1471-2164-14-878.

Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps. 2013. Sharma SK, Bolser D, de Boer J, Sønderkær M, Amoros W, Carboni MF, D’Ambrosio JM, de la Cruz G, Di Genova A, Douches DS, Eguiluz M, Guo X, Guzman F, Hackett CA, Hamilton JP, Li G, Li Y, Lozano R, Maass A, Marshall D, Martinez D, McLean K, Mejía N, Milne L, Munive S, Nagy I, Ponce O, Ramirez M, Simon R, Thomson SJ, Torres Y, Waugh R, Zhang Z, Huang S, Visser RG, Bachem CW, Sagredo B, Feingold SE, Orjeda G, Veilleux RE, Bonierbale M, Jacobs JM, Milbourne D, Martin DM, Bryan GJ. G3 (Bethesda). 3(11):2031-47. doi: 10.1534/g3.113.007153.

Cdk5 regulates Rap1 activity. 2013. Utreras E, Henriquez D, Contreras-Vallejos E, Olmos C, Di Genova A, Maass A, Kulkarni AB, Gonzalez-Billault C. Neurochem Int. 62(6):848-53. doi: 10.1016/j.neuint.2013.02.011. Epub 2013 Feb 13.

Bioinformatic survey for new physiological substrates of Cyclin-dependent kinase 5.

Bórquez DA, Olmos C, Álvarez S, Di Genova A, Maass A, González-Billault C.

Genomics. 2013 Apr;101(4):221-8. doi: 10.1016/j.ygeno.2013.01.003. Epub 2013 Feb 4.

Draft genome sequence of the Sulfobacillus thermosulfidooxidans Cutipay strain, an indigenous bacterium isolated from a naturally extreme mining environment in Northern Chile. Travisany D, Di Genova A, Sepúlveda A, Bobadilla-Fazzini RA, Parada P, Maass A. J Bacteriol. 2012 Nov;194(22):6327-8. doi: 10.1128/JB.01622-12.

SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss. 2011

Di Génova A, Aravena A, Zapata L, González M, Maass A, Iturra P.

Database (Oxford);2011:bar050. doi: 10.1093/database/bar050.

Genome wide identification of Acidithiobacillus ferrooxidans (ATCC 23270) transcription factors and comparative analysis of ArsR and MerR metal regulators. 2012. Hödar C, Moreno P, di Genova A, Latorre M, Reyes-Jara A, Maass A, González M, Cambiazo V. Biometals. 25(1):75-93. doi: 10.1007/s10534-011-9484-8. Epub 2011 Aug 10.

Genome sequence and analysis of the tuber crop potato. 2011.

Potato Genome Sequencing Consortium, Xu X, Pan S, Cheng S, Zhang B, Mu D, Ni P, Zhang G, Yang S, Li R, Wang J, Orjeda G, Guzman F, Torres M, Lozano R, Ponce O, Martinez D, De la Cruz G, Chakrabarti SK, Patil VU, Skryabin KG, Kuznetsov BB, Ravin NV, Kolganova TV, Beletsky AV, Mardanov AV, Di Genova A, Bolser DM, Martin DM, Li G, Yang Y, Kuang H, Hu Q, Xiong X, Bishop GJ, Sagredo B, Mejía N, Zagorski W, Gromadka R, Gawor J, Szczesny P, Huang S, Zhang Z, Liang C, He J, Li Y, He Y, Xu J, Zhang Y, Xie B, Du Y, Qu D, Bonierbale M, Ghislain M, Herrera Mdel R, Giuliano G, Pietrella M, Perrotta G, Facella P, O’Brien K, Feingold SE, Barreiro LE, Massa GA, Diambra L, Whitty BR, Vaillancourt B, Lin H, Massa AN, Geoffroy M, Lundback S, DellaPenna D, Buell CR, Sharma SK, Marshall DF, Waugh R, Bryan GJ, Destefanis M, Nagy I, Milbourne D, Thomson SJ, Fiers M, Jacobs JM, Nielsen KL, Sønderkær M, Iovene M, Torres GA, Jiang J, Veilleux RE, Bachem CW, de Boer J, Borm T, Kloosterman B, van Eck H, Datema E, Hekkert Bt, Goverse A, van Ham RC, Visser RG.

Nature. 10;475(7355):189-95. doi: 10.1038/nature10158.